BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006A01LP1|AL425451
(792 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1028 1161 0.0
>3x_Contig1028
Length = 3530
Score = 1161 bits (585), Expect = 0.0
Identities = 599/601 (99%), Gaps = 2/601 (0%)
Strand = Plus / Plus
Query: 1 gatctgttcaagtcatcctgtgtatcagtgctgtgaatagcaacacggcgcatcaaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2928 gatctgttcaagtcatcctgtgtatcagtgctgtgaatagcaacacggcgcatcaaagta 2987
Query: 61 aagaatcgtacctagcgcatattaaaaatatcgttcgaaaagtattgagttcgttgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2988 aagaatcgtacctagcgcatattaaaaatatcgttcgaaaagtattgagttcgttgaaaa 3047
Query: 121 aagatgaatacctaggcttgatcattgttggtagggatggaaatgggcgttccggatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3048 aagatgaatacctaggcttgatcattgttggtagggatggaaatgggcgttccggatgca 3107
Query: 181 ggggtactttttatggatttgtctcgaatacatgggacggctgggatgagattttagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3108 ggggtactttttatggatttgtctcgaatacatgggacggctgggatgagattttagctg 3167
Query: 241 ggttgaaaatcatcgataatactgaagaaatgatattcccaaaccccatatgggaagcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3168 ggttgaaaatcatcgataatactgaagaaatgatattcccaaaccccatatgggaagcta 3227
Query: 301 aggaaatgttacaaactgtggaaagattgatgttaaccgcgatagatttagacgaagcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3228 aggaaatgttacaaactgtggaaagattgatgttaaccgcgatagatttagacgaagcag 3287
Query: 361 aagtcagacacttgataatattgagtggcactcatgacacagacaggaggatcaccaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3288 aagtcagacacttgataatattgagtggcactcatgacacagacaggaggatcaccaagt 3347
Query: 421 tagaagataatttgtatgaacaaaaagttgagcagttacttgaaaaaatgatgaacaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3348 tagaagataatttgtatgaacaaaaagttgagcagttacttgaaaaaatgatgaacaaat 3407
Query: 481 accattgctctgtatcacagtggatcagtgaggatgaaatgaaaccattattgttgcagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 accattgctctgtatcacagtggatcagtgaggatgaaatgaaaccattattgttgcagg 3467
Query: 541 -actatacg-ccccaatggcaatatagcgtatacacagaatttttcaataagaattcctg 598
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3468 aactatacgtccccaatggcaatatagcgtatacacagaatttttcaataagaattcctg 3527
Query: 599 c 599
|
Sbjct: 3528 c 3528
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5820
Number of Sequences: 1807
Number of extensions: 5820
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 792
length of database: 10,358,551
effective HSP length: 16
effective length of query: 776
effective length of database: 10,329,639
effective search space: 8015799864
effective search space used: 8015799864
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)